How do I perform genome-wide association test using WGAVIewer?

WGAViewer is a tool for annotating and helping interpret statistical results generated from a genome-wide association study (GWAS). The result from a GWAS is the input for WGAViewer. You cannot perform genome-wide association test using WGAViewer.

You will have to use other software to generate statistical signals first, for example, PLINK. More.

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