There are studies ongoing to try to determine what the different rates of mortality may mean as the virus spreads across the globe. Speculation by some is that the countries with better health among the population to start with, and better hygiene facilities and practices, and whose citizens have been receiving guidance, listening to, and following the advice of the world health organizations and national health ministries on how to prevent the spread of the pandemic, see fewer deaths because of fewer underlying health problems and better prevention among the high risk. They do not see any mutation of the virus to account for it, so they are studying what other factors are at play.
Results are not yet conclusive and as the Southern Hemisphere goes through their flu season, hopefully more can be determined about the epidemiology and patterns of this particular influenza strain.
During week 1 (January 3-9, 2016), laboratory data indicated that influenza activity increased slightly in the United States. Viral Surveillance: The most frequently identified influenza virus type reported by public health laboratories during week 1 was influenza A, with influenza A (H1N1)pdm09 viruses predominating. The percentage of respiratory specimens testing positive for influenza in clinical laboratories was low.
Pneumonia and Influenza Mortality: The proportion of deaths attributed to pneumonia and influenza (P&I) was below their system-specific epidemic threshold in both the NCHS Mortality Surveillance System and the 122 Cities Mortality Reporting System. Influenza-associated Pediatric Deaths: One influenza-associated pediatric death was reported. Influenza-associated Hospitalizations: A cumulative rate for the season of 1.5 laboratory-confirmed influenza-associated hospitalizations per 100,000 population was reported.
Outpatient Illness Surveillance: The proportion of outpatient visits for influenza-like illness (ILI) was 2.0%, which is below the national baseline of 2.1%. Four of 10 regions reported ILI at or above region-specific baseline levels. Puerto Rico and one state experienced high ILI activity; New York City and seven states experienced low ILI activity; 42 states experienced minimal ILI activity; and the District of Columbia had insufficient data.
Geographic Spread of Influenza: The geographic spread of influenza in Guam, Puerto Rico, and nine states were reported as regional; 11 states reported local activity; the U.S. Virgin Islands and 28 states reported sporadic activity; and the District of Columbia and two states reported no influenza activity. *HHS regions (Region 1 CT, ME, MA, NH, RI, VT; Region 2: NJ, NY, Puerto Rico, US Virgin Islands; Region 3: DE, DC, MD, PA, VA, WV; Region 4: AL, FL, GA, KY, MS, NC, SC, TN; Region 5: IL, IN, MI, MN, OH, WI; Region 6: AR, LA, NM, OK, TX; Region 7: IA, KS, MO, NE; Region 8: CO, MT, ND, SD, UT, WY; Region 9: AZ, CA, Guam, HI, NV; and Region 10: AK, ID, OR, WA). WHO and NREVSS collaborating laboratories, which include both public health and clinical laboratories located in all 50 states, Puerto Rico, and the District of Columbia, report to CDC the total number of respiratory specimens tested for influenza and the number positive for influenza by virus type.
In addition, public health laboratories also report the influenza A subtype (H1 or H3) and influenza B lineage information of the viruses they test and the age or age group of the persons from whom the specimens were collected. Additional data are available at http://gis.cdc.gov/grasp/fluview/fluportaldashboard.html. The results of tests performed by clinical laboratories during the current week are summarized below.
The results of tests performed by public health laboratories, as well as the age group distribution of influenza positive tests, during the current week are summarized below. *The percent of specimens testing positive for influenza is not reported because public health laboratories often receive samples that have already tested positive for influenza at a clinical laboratory and therefore percent positive would not be a valid indicator of influenza activity. Additional information is available at http://www.cdc.gov/flu/weekly/overview.htm.
CDC characterizes influenza viruses through one or more tests including genome sequencing, hemagglutination inhibition (HI) and/or neutralization assays. These data are used to compare how similar currently circulating influenza viruses are to the reference viruses used for developing influenza vaccines, and to monitor for changes in circulating influenza viruses. Historically, HI data have been used most commonly to assess the similarity between reference viruses and circulating viruses to suggest how well the vaccine may work until such time as vaccine effectiveness estimates are available.
During the 2014–2015 season and to date, however, a portion of influenza A (H3N2) viruses do not yield sufficient hemagglutination titers for antigenic characterization by HI. For many of these viruses, CDC performs genetic characterization to determine the genetic group identity of those viruses. In this way, antigenic properties of these viruses can be inferred from viruses within the same genetic group that have been characterized antigenically.
CDC has characterized 209 influenza viruses 49 A (H1N1)pdm09, 128 A (H3N2), and 32 influenza B viruses collected by U.S. laboratories since October 1, 2015. A (H1N1)pdm09 49: All 49 (100%) influenza A (H1N1)pdm09 viruses were antigenically characterized as A/California/7/2009-like, the influenza A (H1N1) component of the 2015-2016 Northern Hemisphere vaccine. A (H3N2) 128: All 128 H3N2 viruses were genetically sequenced and all viruses belonged to genetic groups for which a majority of viruses antigenically characterized were similar to the cell-propagated A/Switzerland/9715293/2013, the influenza A (H3N2) reference virus representing the 2015-2016 Northern Hemisphere vaccine component.
A subset of 78 H3N2 viruses also were antigenically characterized; 77 of 78 (98.7%) H3N2 viruses were A/Switzerland/9715293/2013-like by HI testing or neutralization testing. Yamagata Lineage 25: All 25 (100%) B/Yamagata-lineage viruses were antigenically characterized as B/Phuket/3073/2013-like, which is included as an influenza B component of the 2015-2016 Northern Hemisphere trivalent and quadrivalent influenza vaccines. Victoria Lineage 7: All seven (100%) B/Victoria-lineage viruses were antigenically characterized as B/Brisbane/60/2008-like, which is included as an influenza B component of the 2015-2016 Northern Hemisphere quadrivalent influenza vaccines.
Testing of influenza A(H1N1)pdm09, A(H3N2), and influenza B virus isolates for resistance to neuraminidase inhibitors (oseltamivir, zanamivir, and peramivir) is performed at CDC using a functional assay. Additional A(H1N1)pdm09 and A(H3N2) clinical samples are tested for mutations of the virus known to confer oseltamivir resistance. The data summarized below combine the results of both testing methods.
These samples are routinely obtained for surveillance purposes rather than for diagnostic testing of patients suspected to be infected with antiviral-resistant virus. High levels of resistance to the adamantanes (amantadine and rimantadine) persist among A(H1N1)pdm09 and A(H3N2) viruses (the adamantanes are not effective against influenza B viruses). Therefore, data from adamantane resistance testing are not presented below.
The majority of recently circulating influenza viruses are susceptible to the neuraminidase inhibitor antiviral medications, oseltamivir, zanamivir, and peramivir; however, rare sporadic instances of oseltamivir-resistant and peramivir-resistant influenza A (H1N1)pdm09 and oseltamivir-resistant influenza A (H3N2) viruses have been detected worldwide. Antiviral treatment as early as possible is recommended for patients with confirmed or suspected influenza who have severe, complicated, or progressive illness; who require hospitalization; or who are at high risk. For serious influenza-related complications.
Additional information on recommendations for treatment and chemoprophylaxis of influenza virus infection with antiviral agents is available at http://www.cdc.gov/flu/antivirals/index.htm. Rapid tracking of pneumonia and influenza-associated deaths is done through two systems, the National Center for Health Statistics (NCHS) Mortality Surveillance System and the 122 Cities Mortality Reporting System. NCHS mortality surveillance data are presented by the week the death occurred and P&I percentages are released two weeks after the week of death to allow for collection of enough data to produce a stable P&I percentage.
Users of the data should not expect the two systems to produce the same percentages, and the percent P&I deaths from each system should be compared to the corresponding system-specific baselines and thresholds. Based on NCHS mortality surveillance data available on January 14, 2016, 5.8% of the deaths occurring during the week ending December 26, 2015 (week 51) were due to P&I. This percentage is below the epidemic threshold of 7.3% for week 51.
Region and state-specific data are available at http://www.cdc.gov/flu/weekly/nchs.htm. During week 1, 6.4% of all deaths reported through the 122 Cities Mortality Reporting System were due to P&I. This percentage was below the epidemic threshold of 7.0% for week 1.
One influenza-associated pediatric death was reported to CDC during week 1. This death was associated with an influenza B virus and occurred during week 49 (the week ending December 12, 2015). A total of seven influenza-associated pediatric deaths have been reported during the 2015-2016 season.
The Influenza Hospitalization Surveillance Network (FluSurv-NET) conducts population-based surveillance for laboratory-confirmed influenza-related hospitalizations in children younger than 18 years of age (since the 2003-2004 influenza season) and adults (since the 2005-2006 influenza season). The FluSurv-NET covers more than 70 counties in the 10 Emerging Infections Program (EIP) states (CA, CO, CT, GA, MD, MN, NM, NY, OR, and TN) and additional Influenza Hospitalization Surveillance Project (IHSP) states. The IHSP began during the 2009-2010 season to enhance surveillance during the 2009 H1N1 pandemic.
IHSP sites included IA, ID, MI, OK and SD during the 2009-2010 season; ID, MI, OH, OK, RI, and UT during the 2010-2011 season; MI, OH, RI, and UT during the 2011-2012 season; IA, MI, OH, RI, and UT during the 2012-2013 season; and MI, OH, and UT during the 2013-2014, 2014-15 and 2015-16 seasons. Data gathered are used to estimate age-specific hospitalization rates on a weekly basis, and describe characteristics of persons hospitalized with severe influenza illness. The rates provided are likely to be an underestimate as influenza-related hospitalizations can be missed, either because testing is not performed, or because cases may be attributed to other causes of pneumonia or other common influenza-related complications.
Between October 1, 2015 and January 9, 2016, 423 laboratory-confirmed influenza-associated hospitalizations were reported. The overall hospitalization rate was 1.5 per 100,000 population. The highest rate of hospitalization was among adults aged?65 years (5.2 per 100,000 population), followed by children aged 0-4 years (2.9 per 100,000 population).
Among all hospitalizations, 269 (64.8%) were associated with influenza A, 120 (28.9%) with influenza B, 15 (3.6%) with influenza A and B co-infection, and 11 (2.7%) had no virus type information. Among those with influenza A subtype information, 42 (70.0%) were A(H1N1)pdm09 and 18 (30.0%) were A(H3N2) virus. Clinical findings are preliminary and based on 136 (32.2%) cases with complete medical chart abstraction.
The majority (85.1%) of hospitalized adults had at least one reported underlying medical condition; the most commonly reported were metabolic disorders, cardiovascular disease, and obesity. There were 22 hospitalized children with complete medical chart abstraction, 14 (63.6%) had no identified underlying medical conditions. The most commonly reported underlying medical conditions among pediatric patients were asthma, chronic lung disease, neurologic disorders and obesity.
Among the 6 hospitalized women of childbearing age (15-44 years), 2 were pregnant. Additional FluSurv-NET data can be found at: http://gis.cdc.gov/GRASP/Fluview/FluHospRates.html and http://gis.cdc.gov/grasp/fluview/FluHospChars.html. Nationwide during week 1, 2.0% of patient visits reported through the U.S. Outpatient Influenza-like Illness Surveillance Network (ILINet) were due to influenza-like illness (ILI).
This percentage is below the national baseline of 2.1%. The increase in the percentage of patient visits for ILI in previous weeks may be influenced in part by a reduction in routine healthcare visits during the holidays, as has occurred in previous seasons. Additional data are available at http://gis.cdc.gov/grasp/fluview/fluportaldashboard.html.
On a regional level, the percentage of outpatient visits for ILI ranged from 0.5% to 4.3% during week 1. Four regions (Regions 1, 3, 4, and 6) reported a proportion of outpatient visits for ILI at or above their region-specific baseline levels.
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